Variant report

Variant	rs73254131
Chromosome Location	chr5:113556631-113556632
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10039340	0.83[AMR][1000 genomes]
rs10043160	0.83[AMR][1000 genomes]
rs10055733	0.83[AMR][1000 genomes]
rs10061904	0.83[AMR][1000 genomes]
rs10074992	0.83[AMR][1000 genomes]
rs10076063	0.83[AMR][1000 genomes]
rs13359151	0.83[AMR][1000 genomes]
rs28773853	0.83[AMR][1000 genomes]
rs56373356	0.83[AMR][1000 genomes]
rs60553494	0.83[AMR][1000 genomes]
rs73779718	0.83[AMR][1000 genomes]
rs73779738	0.83[AMR][1000 genomes]
rs73779740	0.83[AMR][1000 genomes]
rs73779741	0.83[AMR][1000 genomes]
rs73779742	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv599432	chr5:113486177-113561766	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv882727	chr5:113548400-113602162	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv1029021	chr5:113551892-113599644	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv537865	chr5:113551892-113599644	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113555200-113561600	Weak transcription	Left Ventricle	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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