Variant report

Variant rs73254624
Chromosome Location chr5:115825441-115825442
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115783600-115829600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr5:115791600-115838000 Weak transcription Right Ventricle heart
3 chr5:115796000-115833400 Strong transcription HUES64 Cell Line embryonic stem cell
4 chr5:115797000-115834800 Strong transcription H1 Cell Line embryonic stem cell
5 chr5:115797000-115838400 Strong transcription Placenta Placenta
6 chr5:115797400-115833800 Strong transcription iPS-18 Cell Line embryonic stem cell
7 chr5:115797600-115834600 Strong transcription H9 Cell Line embryonic stem cell
8 chr5:115797800-115834800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr5:115798000-115833200 Strong transcription HUES48 Cell Line embryonic stem cell
10 chr5:115798000-115834600 Strong transcription iPS-20b Cell Line embryonic stem cell
11 chr5:115799000-115830400 Strong transcription HUES6 Cell Line embryonic stem cell
12 chr5:115799400-115832000 Strong transcription Fetal Muscle Trunk muscle
13 chr5:115803400-115833200 Strong transcription iPS-15b Cell Line embryonic stem cell
14 chr5:115813200-115826200 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr5:115813600-115826800 Strong transcription Fetal Muscle Leg muscle
16 chr5:115813600-115831800 Strong transcription Fetal Stomach stomach
17 chr5:115813600-115832000 Strong transcription Fetal Adrenal Gland Adrenal Gland
18 chr5:115813800-115827200 Weak transcription Primary T cells from cord blood blood
19 chr5:115813800-115830600 Weak transcription HepG2 liver
20 chr5:115813800-115833600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr5:115813800-115851000 Weak transcription Liver Liver
22 chr5:115814000-115826800 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr5:115814000-115830200 Weak transcription Esophagus oesophagus
24 chr5:115814000-115850200 Weak transcription Small Intestine intestine
25 chr5:115814800-115827800 Weak transcription Fetal Heart heart
26 chr5:115816000-115830400 Weak transcription Lung lung
27 chr5:115816000-115838400 Weak transcription Spleen Spleen
28 chr5:115816200-115827000 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr5:115816400-115830000 Weak transcription Rectal Smooth Muscle rectum
30 chr5:115816400-115830400 Weak transcription Primary B cells from cord blood blood
31 chr5:115816800-115827200 Weak transcription Brain Angular Gyrus brain
32 chr5:115816800-115840000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr5:115817000-115826600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr5:115817600-115828000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr5:115817600-115829600 Weak transcription Pancreas Pancrea
36 chr5:115818200-115826000 Strong transcription ES-WA7 Cell Line embryonic stem cell
37 chr5:115818200-115827400 Weak transcription Brain Anterior Caudate brain
38 chr5:115818400-115827200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr5:115818400-115827200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr5:115818600-115830000 Weak transcription Colonic Mucosa Colon
41 chr5:115818600-115833200 Weak transcription Fetal Brain Male brain
42 chr5:115820000-115827200 Strong transcription Duodenum Smooth Muscle Duodenum
43 chr5:115820000-115830200 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr5:115820000-115832600 Strong transcription Cortex derived primary cultured neurospheres brain
45 chr5:115821400-115828600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr5:115821400-115833400 Strong transcription Rectal Mucosa Donor 29 rectum
47 chr5:115821600-115828800 Strong transcription Stomach Smooth Muscle stomach
48 chr5:115822400-115827600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr5:115822600-115830000 Weak transcription Adipose Nuclei Adipose
50 chr5:115822600-115832200 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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