Variant report

Variant	rs73264702
Chromosome Location	chr5:116609793-116609794
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs2162750	1.00[AMR][1000 genomes]
rs56892707	1.00[AMR][1000 genomes]
rs6886340	1.00[AMR][1000 genomes]
rs73266746	1.00[AMR][1000 genomes]
rs73266786	1.00[AMR][1000 genomes]
rs73270527	1.00[AMR][1000 genomes]
rs7713755	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015741	chr5:116525936-116665270	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv599486	chr5:116607979-116669707	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:116606600-116610000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr5:116609400-116609800	Enhancers	Stomach Mucosa	stomach
3	chr5:116609600-116609800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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