Variant report

Variant	rs73269759
Chromosome Location	chr14:65057481-65057482
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs449865	1.00[AMR][1000 genomes]
rs45545942	1.00[AMR][1000 genomes]
rs58080394	0.84[AFR][1000 genomes]
rs59553915	1.00[AMR][1000 genomes]
rs59981106	1.00[AMR][1000 genomes]
rs60825477	0.90[AFR][1000 genomes]
rs61676255	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73269729	0.83[AFR][1000 genomes]
rs73269736	0.83[AFR][1000 genomes]
rs73269785	0.90[AFR][1000 genomes]
rs73269788	0.90[AFR][1000 genomes]
rs73271614	0.84[AFR][1000 genomes]
rs73271619	0.90[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049097	chr14:65027753-65202018	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65040200-65058000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr14:65047800-65059000	Weak transcription	Gastric	stomach
3	chr14:65048800-65068400	Weak transcription	Pancreas	Pancrea
4	chr14:65057000-65057600	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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