Variant report

Variant	rs73269736
Chromosome Location	chr14:65042114-65042115
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs17857382	1.00[AMR][1000 genomes]
rs45557336	1.00[AMR][1000 genomes]
rs58076807	1.00[AMR][1000 genomes]
rs58080394	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60825477	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61212101	1.00[AMR][1000 genomes]
rs61450623	0.84[AFR][1000 genomes]
rs61457510	1.00[AMR][1000 genomes]
rs61740636	1.00[AMR][1000 genomes]
rs73267723	1.00[AMR][1000 genomes]
rs73267741	1.00[AMR][1000 genomes]
rs73267790	1.00[AMR][1000 genomes]
rs73269707	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73269729	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73269759	0.83[AFR][1000 genomes]
rs73269785	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73269788	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73271614	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73271619	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049097	chr14:65027753-65202018	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65021600-65047600	Weak transcription	Pancreas	Pancrea
2	chr14:65036200-65044000	Weak transcription	Fetal Kidney	kidney
3	chr14:65040200-65047200	Weak transcription	Psoas Muscle	Psoas
4	chr14:65040200-65047400	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr14:65040200-65047800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr14:65040200-65048000	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr14:65040200-65051200	Weak transcription	Stomach Smooth Muscle	stomach
8	chr14:65040200-65058000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr14:65040400-65047200	Weak transcription	Rectal Smooth Muscle	rectum
10	chr14:65040400-65048000	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr14:65041200-65045200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr14:65041800-65047200	Weak transcription	Skeletal Muscle Male	skeletal muscle
13	chr14:65041800-65047400	Weak transcription	Skeletal Muscle Female	skeletal muscle
14	chr14:65041800-65048000	Weak transcription	H1 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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