The 2.0 version of rSNPBase

Variant report

Variant rs73270748
Chromosome Location chr5:115799186-115799187
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115774600-115811000 Weak transcription Small Intestine intestine
2 chr5:115783600-115802200 Weak transcription Colonic Mucosa Colon
3 chr5:115783600-115802200 Weak transcription Pancreas Pancrea
4 chr5:115783600-115803400 Weak transcription Esophagus oesophagus
5 chr5:115783600-115813000 Weak transcription Spleen Spleen
6 chr5:115783600-115813200 Weak transcription Gastric stomach
7 chr5:115783600-115829600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr5:115783800-115803200 Weak transcription Liver Liver
9 chr5:115784200-115800000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr5:115785200-115800200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr5:115788000-115813200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr5:115789000-115800200 Weak transcription Psoas Muscle Psoas
13 chr5:115789600-115812600 Strong transcription Fetal Intestine Large intestine
14 chr5:115789800-115803200 Weak transcription Lung lung
15 chr5:115790000-115800200 Weak transcription Fetal Intestine Small intestine
16 chr5:115790400-115803200 Weak transcription Aorta Aorta
17 chr5:115790400-115812400 Weak transcription HepG2 liver
18 chr5:115790600-115800000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr5:115790800-115800000 Weak transcription Adipose Nuclei Adipose
20 chr5:115790800-115800200 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr5:115790800-115802800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr5:115791000-115800000 Weak transcription Primary B cells from cord blood blood
23 chr5:115791000-115800200 Weak transcription Fetal Brain Female brain
24 chr5:115791000-115800200 Weak transcription Left Ventricle heart
25 chr5:115791000-115801600 Weak transcription Fetal Thymus thymus
26 chr5:115791000-115802200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr5:115791000-115802200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr5:115791000-115802800 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr5:115791000-115804000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr5:115791000-115812400 Weak transcription Fetal Brain Male brain
31 chr5:115791000-115812600 Weak transcription Ovary ovary
32 chr5:115791400-115799400 Weak transcription Brain Cingulate Gyrus brain
33 chr5:115791400-115802200 Weak transcription Primary T cells from cord blood blood
34 chr5:115791400-115805400 Weak transcription HSMMtube muscle
35 chr5:115791600-115809600 Weak transcription Right Atrium heart
36 chr5:115791600-115838000 Weak transcription Right Ventricle heart
37 chr5:115791800-115800200 Weak transcription Fetal Stomach stomach
38 chr5:115792000-115805200 Weak transcription Primary hematopoietic stem cells blood
39 chr5:115792000-115809200 Weak transcription Colon Smooth Muscle Colon
40 chr5:115792400-115799200 Weak transcription Brain Substantia Nigra brain
41 chr5:115792400-115800000 Weak transcription Rectal Smooth Muscle rectum
42 chr5:115792600-115799400 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr5:115792600-115800400 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr5:115792600-115801200 Weak transcription Fetal Lung lung
45 chr5:115792800-115802600 Weak transcription Fetal Kidney kidney
46 chr5:115792800-115812600 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr5:115793600-115799600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr5:115793800-115800000 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr5:115794600-115799600 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr5:115795600-115799600 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015