Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11987550	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11987618	0.85[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs11994555	1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs12544789	0.81[ASN][1000 genomes]
rs12680558	0.81[ASN][1000 genomes]
rs17614056	0.90[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs4961213	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4961214	0.97[AFR][1000 genomes];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4961215	0.81[ASN][1000 genomes]
rs4961216	0.81[ASN][1000 genomes]
rs58824862	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60237266	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66881636	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs67190572	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs67825168	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs68188370	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6993111	0.95[ASN][1000 genomes]
rs72694154	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73274804	0.95[ASN][1000 genomes]
rs73274889	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73278728	0.83[AFR][1000 genomes]
rs7812496	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023510	chr8:87429001-87874948	Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv891151	chr8:87690019-87776019	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1026794	chr8:87698639-87957840	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv539662	chr8:87698639-87957840	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:87733400-87734400	Enhancers	Brain Inferior Temporal Lobe	brain
2	chr8:87734000-87734400	Enhancers	Brain Angular Gyrus	brain
3	chr8:87734000-87734400	Enhancers	Brain Substantia Nigra	brain
4	chr8:87734000-87734800	Enhancers	Brain Hippocampus Middle	brain

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