Variant report

Variant	rs73293879
Chromosome Location	chr7:27767172-27767173
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs59094104	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73284457	1.00[AFR][1000 genomes]
rs73287109	1.00[AFR][1000 genomes]
rs73291816	1.00[AFR][1000 genomes]
rs73293827	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73293846	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73293896	1.00[AMR][1000 genomes]
rs73295568	1.00[AMR][1000 genomes]
rs73295581	1.00[AMR][1000 genomes]
rs73295584	1.00[AMR][1000 genomes]
rs73295585	1.00[AMR][1000 genomes]
rs73295601	1.00[AMR][1000 genomes]
rs73297519	1.00[AMR][1000 genomes]
rs73297525	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949025	chr7:27578167-28075172	Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27760000-27778800	Weak transcription	HSMMtube	muscle
2	chr7:27767000-27767200	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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