Variant report

Variant	rs73298730
Chromosome Location	chr8:85289032-85289033
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs16912733	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16912735	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16912736	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16912785	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16912815	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58010882	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58428339	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61435433	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61538123	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61698585	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73298731	1.00[AMR][1000 genomes]
rs73298773	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300751	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300753	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300755	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300756	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300760	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300762	0.90[AFR][1000 genomes]
rs73300764	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300766	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300768	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300782	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300785	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300787	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300789	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300793	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300796	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73300798	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73304320	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7816160	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7819778	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7820097	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7820544	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7831808	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7831842	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7834453	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7835302	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831374	chr8:85103604-85308976	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv831375	chr8:85272352-85463621	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3481417	chr8:85279453-86145229	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
4	esv3481418	chr8:85279453-86145229	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:85288800-85289200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr8:85289000-85289600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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