The 2.0 version of rSNPBase

Variant report

Variant rs73299892
Chromosome Location chr17:17791799-17791800
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17764200-17803000 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr17:17764400-17799600 Weak transcription A549 lung
3 chr17:17767600-17807400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr17:17768400-17792200 Weak transcription GM12878-XiMat blood
5 chr17:17769200-17804600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
6 chr17:17769400-17792400 Strong transcription Primary T regulatory cells fromperipheralblood blood
7 chr17:17769600-17795200 Strong transcription Primary T cells from cord blood blood
8 chr17:17776400-17803200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr17:17778200-17796200 Weak transcription Hela-S3 cervix
10 chr17:17778600-17793400 Strong transcription Primary T helper naive cells fromperipheralblood blood
11 chr17:17781000-17802600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr17:17781600-17810600 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr17:17782200-17801600 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr17:17782200-17803800 Weak transcription Stomach Mucosa stomach
15 chr17:17782200-17817000 Weak transcription Fetal Kidney kidney
16 chr17:17782600-17796800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr17:17783000-17802200 Weak transcription Dnd41 blood
18 chr17:17783000-17808200 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr17:17783200-17798400 Weak transcription NH-A brain
20 chr17:17786400-17794600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr17:17786400-17795000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr17:17787000-17792600 Genic enhancers Fetal Muscle Leg muscle
23 chr17:17787200-17791800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr17:17787400-17794800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr17:17787400-17796200 Weak transcription Primary hematopoietic stem cells blood
26 chr17:17788000-17797200 Weak transcription Ovary ovary
27 chr17:17788200-17793200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
28 chr17:17788200-17794200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr17:17788200-17796400 Weak transcription Primary B cells from cord blood blood
30 chr17:17788400-17792000 Weak transcription Pancreas Pancrea
31 chr17:17788400-17793800 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr17:17788600-17793400 Weak transcription Primary B cells from peripheral blood blood
33 chr17:17788600-17793800 Weak transcription Rectal Smooth Muscle rectum
34 chr17:17788600-17794800 Weak transcription HMEC breast
35 chr17:17788800-17791800 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr17:17788800-17791800 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr17:17788800-17791800 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr17:17788800-17792000 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr17:17788800-17792000 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr17:17788800-17792200 Weak transcription Gastric stomach
41 chr17:17788800-17792400 Weak transcription H9 Cell Line embryonic stem cell
42 chr17:17788800-17792400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr17:17788800-17793800 Weak transcription Muscle Satellite Cultured Cells --
44 chr17:17788800-17794600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr17:17788800-17796200 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr17:17788800-17796400 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr17:17788800-17796400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr17:17788800-17800000 Weak transcription Psoas Muscle Psoas
49 chr17:17788800-17800200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr17:17789400-17791800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015