The 2.0 version of rSNPBase

Variant report

Variant rs73301894
Chromosome Location chr17:17856330-17856331
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17828200-17861000 Weak transcription Primary B cells from cord blood blood
2 chr17:17828600-17858000 Weak transcription Primary B cells from peripheral blood blood
3 chr17:17839400-17858800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr17:17839400-17860200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr17:17839800-17859800 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr17:17844800-17859800 Weak transcription Colonic Mucosa Colon
7 chr17:17844800-17861400 Weak transcription Liver Liver
8 chr17:17847000-17858000 Weak transcription Adipose Nuclei Adipose
9 chr17:17847000-17860200 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr17:17847200-17861400 Weak transcription Fetal Kidney kidney
11 chr17:17847400-17856800 Weak transcription Thymus Thymus
12 chr17:17847400-17859800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr17:17847400-17860200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr17:17847400-17860600 Weak transcription K562 blood
15 chr17:17847400-17861600 Weak transcription Primary hematopoietic stem cells blood
16 chr17:17847400-17864000 Weak transcription Aorta Aorta
17 chr17:17847600-17857000 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr17:17847600-17860200 Weak transcription Hela-S3 cervix
19 chr17:17847800-17856600 Weak transcription Fetal Thymus thymus
20 chr17:17848200-17856800 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr17:17848400-17858000 Weak transcription Brain Hippocampus Middle brain
22 chr17:17848400-17859800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr17:17848400-17861200 Weak transcription Fetal Muscle Leg muscle
24 chr17:17848400-17862200 Weak transcription Fetal Muscle Trunk muscle
25 chr17:17848600-17856800 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr17:17848600-17858000 Weak transcription HSMMtube muscle
27 chr17:17848600-17860600 Weak transcription Colon Smooth Muscle Colon
28 chr17:17848600-17861400 Weak transcription Brain Substantia Nigra brain
29 chr17:17848600-17861600 Weak transcription Rectal Smooth Muscle rectum
30 chr17:17848800-17856800 Weak transcription Stomach Smooth Muscle stomach
31 chr17:17848800-17858000 Weak transcription Fetal Heart heart
32 chr17:17848800-17863000 Weak transcription Fetal Brain Female brain
33 chr17:17849000-17861600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr17:17849600-17858000 Weak transcription Fetal Intestine Large intestine
35 chr17:17849600-17858200 Weak transcription Duodenum Mucosa Duodenum
36 chr17:17849600-17860400 Weak transcription Small Intestine intestine
37 chr17:17849800-17858000 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr17:17850800-17856800 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr17:17850800-17860200 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr17:17851000-17859800 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr17:17851000-17860200 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr17:17851800-17856800 Weak transcription HSMM muscle
43 chr17:17851800-17858400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
44 chr17:17851800-17860400 Weak transcription HUVEC blood vessel
45 chr17:17851800-17860600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr17:17851800-17860600 Weak transcription NH-A brain
47 chr17:17852000-17858400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr17:17852400-17858000 Weak transcription Fetal Intestine Small intestine
49 chr17:17852400-17858200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr17:17852400-17860600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015