Variant report

Variant	rs73311376
Chromosome Location	chr8:110143959-110143960
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:110142753..110145243-chr8:110152469..110155392,3	K562	blood:

Extended variants
information (count: 55 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs10086547	0.85[AFR][1000 genomes]
rs16879261	1.00[ASN][1000 genomes]
rs16879277	1.00[ASN][1000 genomes]
rs16879288	1.00[ASN][1000 genomes]
rs16879296	0.88[ASN][1000 genomes]
rs16879302	0.88[ASN][1000 genomes]
rs16879319	0.88[ASN][1000 genomes]
rs1993593	1.00[ASN][1000 genomes]
rs4489305	0.94[ASN][1000 genomes]
rs58645331	1.00[ASN][1000 genomes]
rs59395166	1.00[ASN][1000 genomes]
rs59606309	1.00[ASN][1000 genomes]
rs59943608	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60785810	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61245151	1.00[ASN][1000 genomes]
rs61479312	1.00[ASN][1000 genomes]
rs66514810	1.00[ASN][1000 genomes]
rs66540106	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66582255	1.00[ASN][1000 genomes]
rs66595116	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66597282	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66850941	1.00[ASN][1000 genomes]
rs66894192	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66993652	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67013559	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67022633	1.00[ASN][1000 genomes]
rs67131445	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67145203	1.00[ASN][1000 genomes]
rs67220317	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67285523	1.00[ASN][1000 genomes]
rs67650612	1.00[ASN][1000 genomes]
rs67741834	1.00[ASN][1000 genomes]
rs67743002	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs67793872	1.00[ASN][1000 genomes]
rs67919153	1.00[ASN][1000 genomes]
rs67974558	0.94[ASN][1000 genomes]
rs68134891	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6990184	0.97[ASN][1000 genomes]
rs6994530	1.00[ASN][1000 genomes]
rs72680756	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72682635	1.00[ASN][1000 genomes]
rs72682688	0.88[ASN][1000 genomes]
rs73303253	1.00[ASN][1000 genomes]
rs73303256	1.00[ASN][1000 genomes]
rs73311383	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73311385	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73311386	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73311387	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73311394	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73311400	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73313204	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7817013	1.00[ASN][1000 genomes]
rs7823896	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022273	chr8:110026712-110146600	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv539715	chr8:110026712-110146600	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110121400-110144600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:110142400-110144200	Weak transcription	Hela-S3	cervix
3	chr8:110142400-110144800	Weak transcription	Osteobl	bone
4	chr8:110142400-110145000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr8:110142600-110144800	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr8:110143400-110144800	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr8:110143400-110147800	Enhancers	HUES48 Cell Line	embryonic stem cell

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