Variant report

Variant	rs73321604
Chromosome Location	chr14:79317762-79317763
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10483916	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11849965	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17108320	0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17108322	0.84[ASN][1000 genomes]
rs1991001	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs57217615	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs59553734	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs60118334	0.98[ASN][1000 genomes]
rs7155853	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7157445	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73319786	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73321605	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8009822	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832838	chr14:79306627-79445382	Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:79314200-79317800	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr14:79314200-79317800	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr14:79314400-79317800	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr14:79314600-79317800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr14:79314600-79318200	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr14:79314800-79317800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr14:79314800-79318000	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr14:79315600-79318000	Enhancers	iPS-20b Cell Line	embryonic stem cell
9	chr14:79316600-79324400	Weak transcription	H1 Cell Line	embryonic stem cell
10	chr14:79317400-79318000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr14:79317600-79318000	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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