Variant report

Variant	rs73323141
Chromosome Location	chr8:121760948-121760949
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11988273	1.00[AMR][1000 genomes]
rs11991454	1.00[AMR][1000 genomes]
rs4132497	1.00[AMR][1000 genomes]
rs73321219	1.00[AMR][1000 genomes]
rs7812415	1.00[AMR][1000 genomes]
rs9969409	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016172	chr8:121679590-121929916	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv891422	chr8:121680857-121819478	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:58 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:121745200-121761200	Enhancers	Primary T helper cells fromperipheralblood	blood
2	chr8:121745400-121761400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
3	chr8:121745400-121761600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
4	chr8:121745600-121761400	Enhancers	Primary T helper naive cells from peripheral blood	blood
5	chr8:121745800-121761400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
6	chr8:121745800-121774200	Weak transcription	Fetal Stomach	stomach
7	chr8:121749600-121761400	Enhancers	Primary T helper cells PMA-I stimulated	--
8	chr8:121751000-121761000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
9	chr8:121751000-121761000	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr8:121756000-121761800	Weak transcription	Stomach Mucosa	stomach
11	chr8:121756800-121762600	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr8:121757000-121761400	Enhancers	Primary T cells fromperipheralblood	blood
13	chr8:121757000-121761400	Enhancers	Primary T killer memory cells from peripheral blood	blood
14	chr8:121757200-121763800	Enhancers	Primary monocytes fromperipheralblood	blood
15	chr8:121757400-121761400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
16	chr8:121757600-121763000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr8:121757800-121763400	Enhancers	Liver	Liver
18	chr8:121758200-121768600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr8:121758200-121774400	Weak transcription	Left Ventricle	heart
20	chr8:121758400-121761000	Weak transcription	Osteobl	bone
21	chr8:121758400-121769200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr8:121758400-121769400	Weak transcription	HSMM	muscle
23	chr8:121758400-121769400	Weak transcription	NHLF	lung
24	chr8:121758400-121770600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr8:121758400-121771800	Weak transcription	Pancreas	Pancrea
26	chr8:121758400-121774400	Weak transcription	Lung	lung
27	chr8:121759000-121761400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
28	chr8:121759200-121762600	Enhancers	HepG2	liver
29	chr8:121759400-121763600	Enhancers	Primary B cells from peripheral blood	blood
30	chr8:121759600-121761400	Enhancers	Primary hematopoietic stem cells short term culture	blood
31	chr8:121759600-121761400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr8:121759600-121761400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr8:121759600-121761400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr8:121759600-121761600	Enhancers	Primary hematopoietic stem cells	blood
35	chr8:121759600-121761600	Enhancers	Fetal Thymus	thymus
36	chr8:121759600-121763400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
37	chr8:121759800-121761400	Enhancers	GM12878-XiMat	blood
38	chr8:121759800-121761600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
39	chr8:121759800-121761800	Enhancers	Duodenum Mucosa	Duodenum
40	chr8:121759800-121762200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr8:121759800-121764400	Enhancers	Skeletal Muscle Female	skeletal muscle
42	chr8:121760000-121761000	Weak transcription	Sigmoid Colon	Sigmoid Colon
43	chr8:121760200-121761200	Enhancers	Fetal Kidney	kidney
44	chr8:121760200-121761600	Enhancers	Primary neutrophils fromperipheralblood	blood
45	chr8:121760200-121761600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
46	chr8:121760200-121762200	Enhancers	Skeletal Muscle Male	skeletal muscle
47	chr8:121760200-121764400	Enhancers	HSMMtube	muscle
48	chr8:121760400-121761000	Enhancers	Duodenum Smooth Muscle	Duodenum
49	chr8:121760400-121761000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
50	chr8:121760400-121762600	Enhancers	Dnd41	blood

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