Variant report

Variant	rs73327796
Chromosome Location	chr14:79872984-79872985
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs17109201	1.00[AMR][1000 genomes]
rs57583777	1.00[AMR][1000 genomes]
rs60000826	1.00[AMR][1000 genomes]
rs73325782	1.00[AMR][1000 genomes]
rs73325787	1.00[AMR][1000 genomes]
rs73325788	1.00[AMR][1000 genomes]
rs73325790	1.00[AMR][1000 genomes]
rs73325792	1.00[AMR][1000 genomes]
rs73325794	1.00[AMR][1000 genomes]
rs73327707	1.00[AMR][1000 genomes]
rs73330015	1.00[AMR][1000 genomes]
rs73339463	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931412	chr14:79420297-79928269	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv902110	chr14:79624492-79998294	Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv530072	chr14:79769657-79928269	Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv902111	chr14:79807197-79890677	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:79856800-79873800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr14:79861800-79874600	Weak transcription	Stomach Smooth Muscle	stomach
3	chr14:79867800-79877600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr14:79871200-79873600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr14:79872000-79873200	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr14:79872600-79873600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr14:79872600-79884800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr14:79872800-79873000	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr14:79872800-79874400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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