Variant report

Variant	rs73330329
Chromosome Location	chr8:127876215-127876216
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10505495	0.87[AMR][1000 genomes]
rs16901795	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57711715	0.87[AMR][1000 genomes]
rs7017492	0.89[AMR][1000 genomes]
rs7017807	0.87[AMR][1000 genomes]
rs73330318	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73340975	0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1819408	chr8:127835876-127898165	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv6382	chr8:127845446-127890549	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv831456	chr8:127861583-128025508	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:127870600-127877400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr8:127870600-127880400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr8:127873600-127878400	Weak transcription	Right Atrium	heart
4	chr8:127875000-127876400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr8:127875200-127877200	Weak transcription	Stomach Mucosa	stomach
6	chr8:127876000-127876400	Enhancers	NHEK	skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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