Variant report

Variant	rs73340975
Chromosome Location	chr8:127779003-127779004
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10505495	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16901795	0.87[AMR][1000 genomes]
rs57711715	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7017807	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73330318	0.87[AMR][1000 genomes]
rs73330329	0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891438	chr8:127670339-127845702	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv831455	chr8:127681762-127786257	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:127762400-127781200	Weak transcription	Pancreas	Pancrea
2	chr8:127778800-127779600	Enhancers	NHEK	skin
3	chr8:127779000-127779200	Enhancers	Adipose Nuclei	Adipose

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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