Variant report

Variant	rs73334307
Chromosome Location	chr8:122475451-122475452
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs16895373	1.00[EUR][1000 genomes]
rs4552906	1.00[EUR][1000 genomes]
rs57302520	1.00[EUR][1000 genomes]
rs58805546	1.00[EUR][1000 genomes]
rs59584500	1.00[EUR][1000 genomes]
rs59736483	1.00[EUR][1000 genomes]
rs61612725	1.00[EUR][1000 genomes]
rs6989638	1.00[EUR][1000 genomes]
rs73330290	1.00[EUR][1000 genomes]
rs73332307	1.00[EUR][1000 genomes]
rs73332311	1.00[EUR][1000 genomes]
rs73332346	0.91[AFR][1000 genomes]
rs73707599	1.00[EUR][1000 genomes]
rs73707602	1.00[EUR][1000 genomes]
rs73709809	1.00[EUR][1000 genomes]
rs7814136	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831445	chr8:122336877-122509300	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1033501	chr8:122436332-122758651	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:122467200-122481600	Weak transcription	NHLF	lung
2	chr8:122468600-122487600	Weak transcription	Fetal Kidney	kidney
3	chr8:122475000-122476600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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