Variant report

Variant	rs59736483
Chromosome Location	chr8:122657448-122657449
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10088185	1.00[EUR][1000 genomes]
rs10101781	1.00[EUR][1000 genomes]
rs10110191	1.00[EUR][1000 genomes]
rs10112095	1.00[EUR][1000 genomes]
rs16896149	1.00[EUR][1000 genomes]
rs16896151	1.00[EUR][1000 genomes]
rs16896176	1.00[EUR][1000 genomes]
rs16896185	1.00[EUR][1000 genomes]
rs28533790	1.00[EUR][1000 genomes]
rs6991056	1.00[EUR][1000 genomes]
rs6995066	1.00[EUR][1000 genomes]
rs73326803	1.00[EUR][1000 genomes]
rs73334307	1.00[EUR][1000 genomes]
rs7814424	1.00[EUR][1000 genomes]
rs7826213	1.00[EUR][1000 genomes]
rs7844994	1.00[EUR][1000 genomes]
rs9297654	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033501	chr8:122436332-122758651	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv831446	chr8:122535039-122711959	Enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	esv1848372	chr8:122653247-122716049	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:122656000-122661800	Weak transcription	A549	lung
2	chr8:122657200-122657600	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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