Variant report

Variant	rs10110191
Chromosome Location	chr8:122822025-122822026
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:122814370..122817062-chr8:122820839..122823793,2	MCF-7	breast:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10088185	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10090678	1.00[EUR][1000 genomes]
rs10101781	1.00[EUR][1000 genomes]
rs10112095	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1030977	0.99[AFR][1000 genomes]
rs1030978	0.99[AFR][1000 genomes]
rs1030979	0.99[AFR][1000 genomes]
rs13251300	0.96[AFR][1000 genomes]
rs1371715	0.96[AFR][1000 genomes]
rs1371716	0.99[AFR][1000 genomes]
rs16896149	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16896151	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16896176	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16896185	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28533790	1.00[EUR][1000 genomes]
rs59736483	1.00[EUR][1000 genomes]
rs60176984	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6991056	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6995066	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73326803	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73326826	0.83[AMR][1000 genomes]
rs73328860	0.83[AMR][1000 genomes]
rs7814424	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7826213	1.00[EUR][1000 genomes]
rs7844994	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9297654	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs964868	0.99[AFR][1000 genomes]
rs964869	0.99[AFR][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:122816200-122823600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr8:122816400-122830600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr8:122817200-122823800	Weak transcription	Duodenum Mucosa	Duodenum
4	chr8:122819400-122824000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr8:122819600-122823400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr8:122819600-122823600	Weak transcription	HMEC	breast
7	chr8:122819600-122823800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:122819800-122822200	Weak transcription	NHLF	lung
9	chr8:122820000-122822400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr8:122820000-122823600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr8:122820200-122823600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr8:122820200-122823600	Weak transcription	NH-A	brain
13	chr8:122820400-122822200	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr8:122820400-122822200	Weak transcription	HSMM	muscle
15	chr8:122820400-122823400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr8:122820400-122823400	Weak transcription	HSMMtube	muscle
17	chr8:122820400-122823600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr8:122821800-122823400	Enhancers	NHDF-Ad	bronchial
19	chr8:122821800-122824600	Enhancers	Osteobl	bone
20	chr8:122822000-122823600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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