Variant report

Variant	rs7814424
Chromosome Location	chr8:122813849-122813850
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:122805215..122808178-chr8:122812911..122815286,2	MCF-7	breast:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10088185	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10090678	1.00[EUR][1000 genomes]
rs10101781	1.00[EUR][1000 genomes]
rs10110191	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10112095	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1030977	0.99[AFR][1000 genomes]
rs1030978	0.99[AFR][1000 genomes]
rs1030979	0.99[AFR][1000 genomes]
rs13251300	0.96[AFR][1000 genomes]
rs1371715	0.96[AFR][1000 genomes]
rs1371716	0.99[AFR][1000 genomes]
rs16896149	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16896151	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16896176	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16896185	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28533790	1.00[EUR][1000 genomes]
rs59736483	1.00[EUR][1000 genomes]
rs60176984	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6991056	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6995066	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73326803	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73326826	0.83[AMR][1000 genomes]
rs73328860	0.83[AMR][1000 genomes]
rs7826213	1.00[EUR][1000 genomes]
rs7844994	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9297654	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs964868	0.99[AFR][1000 genomes]
rs964869	0.99[AFR][1000 genomes]

No data

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:122809800-122815400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr8:122809800-122818400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr8:122812200-122815400	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr8:122812200-122815800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr8:122812400-122815400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr8:122812600-122814200	Enhancers	NHLF	lung
7	chr8:122812600-122815000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr8:122812600-122815600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr8:122812600-122815600	Enhancers	Placenta	Placenta
10	chr8:122812800-122814400	Enhancers	Muscle Satellite Cultured Cells	--
11	chr8:122812800-122815400	Enhancers	HSMM	muscle
12	chr8:122812800-122815600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
13	chr8:122812800-122815800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr8:122812800-122818800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr8:122813200-122814000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr8:122813200-122814600	Enhancers	Stomach Mucosa	stomach
17	chr8:122813200-122815400	Weak transcription	Fetal Intestine Small	intestine
18	chr8:122813400-122814000	Bivalent Enhancer	Adipose Nuclei	Adipose
19	chr8:122813400-122814000	Flanking Active TSS	Fetal Lung	lung
20	chr8:122813400-122814000	Enhancers	Osteobl	bone
21	chr8:122813400-122814400	Enhancers	Hela-S3	cervix
22	chr8:122813400-122814600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr8:122813600-122814000	Enhancers	Skeletal Muscle Male	skeletal muscle
24	chr8:122813600-122814200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr8:122813600-122814200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr8:122813600-122814200	Enhancers	Fetal Stomach	stomach
27	chr8:122813600-122814200	Enhancers	Small Intestine	intestine
28	chr8:122813600-122814200	Enhancers	NHDF-Ad	bronchial
29	chr8:122813600-122814400	Enhancers	NHEK	skin
30	chr8:122813800-122814000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr8:122813800-122814000	Bivalent/Poised TSS	Fetal Brain Male	brain
32	chr8:122813800-122814000	Enhancers	NH-A	brain
33	chr8:122813800-122814200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr8:122813800-122814200	Enhancers	Esophagus	oesophagus
35	chr8:122813800-122814200	Enhancers	Sigmoid Colon	Sigmoid Colon
36	chr8:122813800-122814200	Enhancers	Skeletal Muscle Female	skeletal muscle
37	chr8:122813800-122814200	Enhancers	HUVEC	blood vessel
38	chr8:122813800-122814400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr8:122813800-122814600	Enhancers	Rectal Mucosa Donor 31	rectum

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