Variant report

Variant	rs733540
Chromosome Location	chr21:40074687-40074688
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1041780	0.90[EUR][1000 genomes]
rs2836604	0.90[EUR][1000 genomes]
rs2836616	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2836618	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2836622	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2836625	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2836627	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2836635	0.83[AFR][1000 genomes]
rs2836636	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs28379071	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28446127	0.86[EUR][1000 genomes]
rs458465	0.93[TSI][hapmap];0.81[EUR][1000 genomes]
rs464519	0.87[MEX][hapmap];0.93[TSI][hapmap];0.82[EUR][1000 genomes]
rs4817954	0.81[CEU][hapmap];0.93[TSI][hapmap];0.84[EUR][1000 genomes]
rs55742466	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs55819392	0.89[EUR][1000 genomes]
rs56154327	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6517474	0.81[CEU][hapmap];0.86[MEX][hapmap];0.93[TSI][hapmap];0.84[EUR][1000 genomes]
rs743447	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8126719	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8126858	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8134675	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9976546	0.88[CEU][hapmap];0.86[EUR][1000 genomes]
rs9979396	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9979424	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9979888	0.84[CEU][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.84[EUR][1000 genomes]
rs9982483	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9983626	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40073800-40074800	Enhancers	Fetal Heart	heart
2	chr21:40074000-40074800	Bivalent Enhancer	Fetal Stomach	stomach
3	chr21:40074200-40074800	Active TSS	Aorta	Aorta
4	chr21:40074200-40074800	Enhancers	Colon Smooth Muscle	Colon
5	chr21:40074600-40074800	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach

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