Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs17682594	1.00[EUR][1000 genomes]
rs57409700	0.93[EUR][1000 genomes]
rs57587635	1.00[EUR][1000 genomes]
rs59383987	0.87[EUR][1000 genomes]
rs60600417	0.93[EUR][1000 genomes]
rs61574775	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73351356	1.00[EUR][1000 genomes]
rs73351358	1.00[EUR][1000 genomes]
rs73355904	1.00[EUR][1000 genomes]
rs73355905	1.00[EUR][1000 genomes]
rs73355906	1.00[EUR][1000 genomes]
rs73355908	1.00[EUR][1000 genomes]
rs73355929	1.00[EUR][1000 genomes]
rs73355931	1.00[EUR][1000 genomes]
rs73357989	0.93[EUR][1000 genomes]
rs73357992	0.90[EUR][1000 genomes]
rs73357998	0.93[EUR][1000 genomes]
rs73358002	0.93[EUR][1000 genomes]
rs73359903	0.93[EUR][1000 genomes]
rs73359912	0.93[EUR][1000 genomes]
rs73359914	0.93[EUR][1000 genomes]
rs73359925	0.83[EUR][1000 genomes]
rs73359929	0.87[EUR][1000 genomes]
rs987862	0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv888026	chr7:52588348-53013671	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv888027	chr7:52588348-53190508	Weak transcription Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv888029	chr7:52797324-52881559	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv888030	chr7:52797324-52894247	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	nsv888031	chr7:52797324-52944424	ZNF genes & repeats Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
6	esv3478269	chr7:52802726-52803282	Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv3486878	chr7:52802755-52803240	Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv3486877	chr7:52802757-52803260	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:52785600-52804400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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