Variant report

Variant	rs73361706
Chromosome Location	chr7:70611320-70611321
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12698966	1.00[AMR][1000 genomes]
rs56795865	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56942091	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73357805	1.00[AMR][1000 genomes]
rs73361707	0.87[AFR][1000 genomes]
rs73361714	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73361715	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73361726	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73361747	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73361771	1.00[AMR][1000 genomes]
rs73361776	1.00[AMR][1000 genomes]
rs7803452	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519090	chr7:70085934-71071896	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1034662	chr7:70275712-70722953	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1015261	chr7:70404302-71255933	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:70599600-70611400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr7:70601000-70613600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr7:70608800-70611800	Weak transcription	Aorta	Aorta
4	chr7:70610000-70612200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr7:70610200-70611800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr7:70610600-70611600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr7:70610800-70611600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr7:70610800-70611600	Enhancers	Fetal Muscle Trunk	muscle
9	chr7:70610800-70612000	Enhancers	Fetal Muscle Leg	muscle
10	chr7:70610800-70612000	Enhancers	Ovary	ovary
11	chr7:70611000-70611400	Enhancers	H1 Cell Line	embryonic stem cell
12	chr7:70611000-70611400	Enhancers	Brain Angular Gyrus	brain
13	chr7:70611000-70611600	Enhancers	iPS-20b Cell Line	embryonic stem cell
14	chr7:70611000-70611600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr7:70611000-70611800	Genic enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr7:70611000-70611800	Enhancers	iPS-18 Cell Line	embryonic stem cell
17	chr7:70611000-70612000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr7:70611000-70612000	Enhancers	H9 Cell Line	embryonic stem cell
19	chr7:70611000-70612000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr7:70611000-70612000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr7:70611000-70612000	Enhancers	Left Ventricle	heart
22	chr7:70611000-70612200	Enhancers	Fetal Lung	lung
23	chr7:70611000-70612600	Enhancers	Fetal Heart	heart
24	chr7:70611200-70611600	Weak transcription	HUES48 Cell Line	embryonic stem cell
25	chr7:70611200-70611600	Enhancers	Fetal Thymus	thymus
26	chr7:70611200-70611800	Enhancers	HUES64 Cell Line	embryonic stem cell
27	chr7:70611200-70611800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
28	chr7:70611200-70611800	Enhancers	Colon Smooth Muscle	Colon
29	chr7:70611200-70611800	Enhancers	Right Atrium	heart
30	chr7:70611200-70612000	Enhancers	ES-I3 Cell Line	embryonic stem cell
31	chr7:70611200-70612000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr7:70611200-70612000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr7:70611200-70612000	Enhancers	HUES6 Cell Line	embryonic stem cell
34	chr7:70611200-70612000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr7:70611200-70612000	Enhancers	Pancreas	Pancrea
36	chr7:70611200-70612000	Enhancers	Placenta Amnion	Placenta Amnion
37	chr7:70611200-70612200	Enhancers	Fetal Stomach	stomach

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