Variant report

Variant	rs73361707
Chromosome Location	chr7:70611836-70611837
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs73361706	0.87[AFR][1000 genomes]
rs73361714	0.87[AFR][1000 genomes]
rs73361715	0.87[AFR][1000 genomes]
rs73361726	0.87[AFR][1000 genomes]
rs73361747	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519090	chr7:70085934-71071896	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1034662	chr7:70275712-70722953	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1015261	chr7:70404302-71255933	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:70601000-70613600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr7:70610000-70612200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr7:70610800-70612000	Enhancers	Fetal Muscle Leg	muscle
4	chr7:70610800-70612000	Enhancers	Ovary	ovary
5	chr7:70611000-70612000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr7:70611000-70612000	Enhancers	H9 Cell Line	embryonic stem cell
7	chr7:70611000-70612000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr7:70611000-70612000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr7:70611000-70612000	Enhancers	Left Ventricle	heart
10	chr7:70611000-70612200	Enhancers	Fetal Lung	lung
11	chr7:70611000-70612600	Enhancers	Fetal Heart	heart
12	chr7:70611200-70612000	Enhancers	ES-I3 Cell Line	embryonic stem cell
13	chr7:70611200-70612000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr7:70611200-70612000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr7:70611200-70612000	Enhancers	HUES6 Cell Line	embryonic stem cell
16	chr7:70611200-70612000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr7:70611200-70612000	Enhancers	Pancreas	Pancrea
18	chr7:70611200-70612000	Enhancers	Placenta Amnion	Placenta Amnion
19	chr7:70611200-70612200	Enhancers	Fetal Stomach	stomach
20	chr7:70611400-70612000	Enhancers	iPS-15b Cell Line	embryonic stem cell
21	chr7:70611400-70612000	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
22	chr7:70611400-70612800	Weak transcription	H1 Cell Line	embryonic stem cell
23	chr7:70611600-70612200	Genic enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr7:70611600-70613000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
25	chr7:70611600-70613000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
26	chr7:70611600-70613200	Weak transcription	Fetal Muscle Trunk	muscle
27	chr7:70611600-70623800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr7:70611800-70612000	ZNF genes & repeats	Aorta	Aorta
29	chr7:70611800-70612800	Weak transcription	HUES64 Cell Line	embryonic stem cell
30	chr7:70611800-70613200	Weak transcription	Right Atrium	heart
31	chr7:70611800-70613800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
32	chr7:70611800-70613800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
33	chr7:70611800-70615800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr7:70611800-70616000	Weak transcription	Colon Smooth Muscle	Colon
35	chr7:70611800-70617000	Weak transcription	HUES48 Cell Line	embryonic stem cell
36	chr7:70611800-70620200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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