Variant report

Variant	rs73385063
Chromosome Location	chr15:39601000-39601001
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs13379912	1.00[AMR][1000 genomes]
rs16952148	1.00[AMR][1000 genomes]
rs16969021	1.00[AMR][1000 genomes]
rs16969023	1.00[AMR][1000 genomes]
rs16969030	1.00[AMR][1000 genomes]
rs16969032	1.00[AMR][1000 genomes]
rs16969052	1.00[AMR][1000 genomes]
rs16969077	1.00[AMR][1000 genomes]
rs4091683	1.00[AMR][1000 genomes]
rs60614142	1.00[AMR][1000 genomes]
rs60827388	1.00[AMR][1000 genomes]
rs74010137	1.00[AMR][1000 genomes]
rs9672485	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv569212	chr15:39265857-39620617	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:39596600-39605800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr15:39597000-39602600	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr15:39597200-39602600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr15:39597400-39602000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr15:39597400-39602400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr15:39597400-39623200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr15:39597600-39602400	Weak transcription	NHEK	skin
8	chr15:39598000-39602600	Weak transcription	NHLF	lung
9	chr15:39598000-39609200	Weak transcription	HSMM	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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