The 2.0 version of rSNPBase

Variant report

Variant rs73398549
Chromosome Location chr6:28108353-28108354
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:28105600-28109200 Weak transcription Gastric stomach
2 chr6:28105800-28108800 Weak transcription Stomach Mucosa stomach
3 chr6:28105800-28109000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr6:28105800-28109000 Weak transcription Placenta Placenta
5 chr6:28105800-28109000 Weak transcription A549 lung
6 chr6:28105800-28109200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr6:28105800-28109200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr6:28105800-28109200 Weak transcription Esophagus oesophagus
9 chr6:28105800-28109200 Weak transcription Left Ventricle heart
10 chr6:28105800-28109200 Weak transcription Lung lung
11 chr6:28105800-28109200 Weak transcription Pancreas Pancrea
12 chr6:28106000-28108800 Weak transcription NHLF lung
13 chr6:28106000-28109000 Weak transcription Brain Cingulate Gyrus brain
14 chr6:28106000-28109000 Weak transcription Brain Substantia Nigra brain
15 chr6:28106000-28109000 Weak transcription Fetal Muscle Leg muscle
16 chr6:28106000-28109000 Weak transcription HSMMtube muscle
17 chr6:28106000-28109000 Weak transcription NH-A brain
18 chr6:28106000-28109200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr6:28106000-28109200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr6:28106000-28109200 Weak transcription H9 Cell Line embryonic stem cell
21 chr6:28106000-28109200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr6:28106000-28109200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr6:28106000-28109200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr6:28106000-28109200 Weak transcription Brain Angular Gyrus brain
25 chr6:28106000-28109200 Weak transcription Brain Inferior Temporal Lobe brain
26 chr6:28106000-28109200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr6:28106000-28109200 Weak transcription Colonic Mucosa Colon
28 chr6:28106000-28109200 Weak transcription Fetal Brain Male brain
29 chr6:28106000-28109200 Weak transcription Fetal Intestine Large intestine
30 chr6:28106000-28109200 Weak transcription Fetal Kidney kidney
31 chr6:28106000-28109200 Weak transcription Right Ventricle heart
32 chr6:28106000-28109200 Weak transcription Small Intestine intestine
33 chr6:28106000-28109200 Weak transcription Spleen Spleen
34 chr6:28106000-28109200 Weak transcription HMEC breast
35 chr6:28106000-28109200 Weak transcription HSMM muscle
36 chr6:28106000-28109200 Weak transcription NHEK skin
37 chr6:28106200-28108800 Weak transcription Colon Smooth Muscle Colon
38 chr6:28106200-28108800 Weak transcription Fetal Heart heart
39 chr6:28106200-28109000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr6:28106200-28109000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr6:28106200-28109000 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr6:28106200-28109000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr6:28106200-28109000 Weak transcription Muscle Satellite Cultured Cells --
44 chr6:28106200-28109000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr6:28106200-28109000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr6:28106200-28109000 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr6:28106200-28109000 Weak transcription Fetal Lung lung
48 chr6:28106200-28109000 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr6:28106200-28109000 Weak transcription HUVEC blood vessel
50 chr6:28106200-28109200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015