Variant report

Variant	rs73403912
Chromosome Location	chr11:10355007-10355008
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs4698	1.00[AMR][1000 genomes]
rs55796000	1.00[AMR][1000 genomes]
rs56013107	1.00[AMR][1000 genomes]
rs56962991	1.00[AMR][1000 genomes]
rs57197571	1.00[AMR][1000 genomes]
rs57361167	1.00[AMR][1000 genomes]
rs57428208	1.00[AMR][1000 genomes]
rs57616147	1.00[AMR][1000 genomes]
rs57626581	1.00[AMR][1000 genomes]
rs57644762	1.00[AMR][1000 genomes]
rs57895857	1.00[AMR][1000 genomes]
rs59076108	1.00[AMR][1000 genomes]
rs59107366	1.00[AMR][1000 genomes]
rs59168644	1.00[AMR][1000 genomes]
rs59505179	1.00[AMR][1000 genomes]
rs59869332	1.00[AMR][1000 genomes]
rs60837023	1.00[AMR][1000 genomes]
rs73412867	1.00[AMR][1000 genomes]
rs73412871	1.00[AMR][1000 genomes]
rs73412874	1.00[AMR][1000 genomes]
rs73412879	1.00[AMR][1000 genomes]
rs73412887	1.00[AMR][1000 genomes]
rs73412902	1.00[AMR][1000 genomes]
rs73415005	1.00[AMR][1000 genomes]
rs73415007	1.00[AMR][1000 genomes]
rs73415034	1.00[AMR][1000 genomes]
rs73415036	1.00[AMR][1000 genomes]
rs73415093	1.00[AMR][1000 genomes]
rs73415101	1.00[AMR][1000 genomes]
rs73416903	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430319	chr11:10027543-10711224	Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:10348200-10370200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:10354800-10355800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr11:10354800-10355800	Enhancers	Adipose Nuclei	Adipose
4	chr11:10355000-10355400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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