Variant report

Variant	rs73405282
Chromosome Location	chr7:99198048-99198049
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs28365076	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28969395	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs41300725	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs41301655	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs41303952	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs45571732	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs45613141	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55863343	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58895239	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73406803	1.00[AMR][1000 genomes]
rs73408528	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73408555	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73408566	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73408573	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73410637	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73410646	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:99196600-99199400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr7:99196600-99199400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:99197200-99213800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr7:99197600-99198400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
5	chr7:99197800-99203800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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