Variant report

Variant	rs73411698
Chromosome Location	chr12:119039375-119039376
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs73411647	1.00[AMR][1000 genomes]
rs73411686	1.00[AMR][1000 genomes]
rs73411700	1.00[AMR][1000 genomes]
rs73413406	1.00[AMR][1000 genomes]
rs73413407	1.00[AMR][1000 genomes]
rs73413408	1.00[AMR][1000 genomes]
rs73413464	1.00[AMR][1000 genomes]
rs73413482	1.00[AMR][1000 genomes]
rs73413498	1.00[AMR][1000 genomes]
rs7967263	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv930978	chr12:118866332-119450600	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	nsv1043906	chr12:118991884-119087146	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:119038400-119041200	Weak transcription	Pancreas	Pancrea
2	chr12:119038600-119040800	Weak transcription	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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