Variant report

Variant rs73416648
Chromosome Location chr6:29936269-29936270
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29916800-29940200 Weak transcription Gastric stomach
2 chr6:29927800-29938800 Weak transcription Spleen Spleen
3 chr6:29933200-29936400 Enhancers Fetal Heart heart
4 chr6:29933200-29937400 Weak transcription Placenta Amnion Placenta Amnion
5 chr6:29933400-29937200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr6:29933600-29942400 Weak transcription Lung lung
7 chr6:29933800-29936400 Enhancers Fetal Muscle Leg muscle
8 chr6:29933800-29936600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr6:29934000-29936400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
10 chr6:29934000-29936400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
11 chr6:29934200-29936400 Enhancers Adipose Nuclei Adipose
12 chr6:29934200-29936400 Enhancers Rectal Mucosa Donor 31 rectum
13 chr6:29934200-29936400 Enhancers Stomach Mucosa stomach
14 chr6:29934200-29936600 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr6:29934200-29936600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr6:29934200-29936600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr6:29934200-29936600 Enhancers HSMM muscle
18 chr6:29934200-29936600 Enhancers NHEK skin
19 chr6:29934200-29937200 Enhancers HMEC breast
20 chr6:29934200-29939800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr6:29934400-29936400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr6:29934400-29936400 Enhancers HUES48 Cell Line embryonic stem cell
23 chr6:29934400-29936600 Enhancers ES-I3 Cell Line embryonic stem cell
24 chr6:29934400-29936600 Enhancers A549 lung
25 chr6:29934400-29938200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr6:29934400-29944200 Weak transcription Aorta Aorta
27 chr6:29934600-29936600 Enhancers Skeletal Muscle Male skeletal muscle
28 chr6:29934600-29936800 Weak transcription Colonic Mucosa Colon
29 chr6:29934800-29936400 Enhancers HUES6 Cell Line embryonic stem cell
30 chr6:29934800-29936600 Enhancers Duodenum Smooth Muscle Duodenum
31 chr6:29934800-29936600 Enhancers Skeletal Muscle Female skeletal muscle
32 chr6:29934800-29939600 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr6:29934800-29942600 Weak transcription Brain Substantia Nigra brain
34 chr6:29935000-29936400 Enhancers Thymus Thymus
35 chr6:29935000-29936600 Enhancers Hela-S3 cervix
36 chr6:29935200-29936400 Enhancers Psoas Muscle Psoas
37 chr6:29935200-29936800 Enhancers Sigmoid Colon Sigmoid Colon
38 chr6:29935400-29936400 Enhancers HepG2 liver
39 chr6:29935400-29936600 Enhancers Left Ventricle heart
40 chr6:29935400-29939600 Weak transcription Primary T cells from cord blood blood
41 chr6:29935400-29942600 Weak transcription GM12878-XiMat blood
42 chr6:29935400-29943400 Weak transcription Small Intestine intestine
43 chr6:29935600-29939400 Weak transcription Primary T cells fromperipheralblood blood
44 chr6:29935600-29939800 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr6:29935600-29940000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr6:29935600-29942600 Weak transcription Brain Anterior Caudate brain
47 chr6:29935600-29944800 Weak transcription Dnd41 blood
48 chr6:29935800-29936400 Enhancers Duodenum Mucosa Duodenum
49 chr6:29935800-29937000 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr6:29935800-29938000 Weak transcription Monocytes-CD14+_RO01746 blood

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