Variant report

Variant	rs73430674
Chromosome Location	chr6:54686007-54686008
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10484995	1.00[AMR][1000 genomes]
rs16885982	1.00[AMR][1000 genomes]
rs16885988	1.00[AMR][1000 genomes]
rs16885992	1.00[AMR][1000 genomes]
rs16886006	1.00[AMR][1000 genomes]
rs16886011	1.00[AMR][1000 genomes]
rs35360689	1.00[AMR][1000 genomes]
rs73446077	1.00[AMR][1000 genomes]
rs73446082	1.00[AMR][1000 genomes]
rs73446087	1.00[AMR][1000 genomes]
rs73446089	1.00[AMR][1000 genomes]
rs73446094	1.00[AMR][1000 genomes]
rs9464155	1.00[AMR][1000 genomes]
rs9464159	1.00[AMR][1000 genomes]
rs9464160	1.00[AMR][1000 genomes]
rs9464167	1.00[AMR][1000 genomes]
rs9475065	1.00[AMR][1000 genomes]
rs9475066	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv885900	chr6:54517968-54852462	Active TSS Bivalent Enhancer Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:54683400-54689600	Weak transcription	Pancreas	Pancrea

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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