Variant report

Variant	rs10484995
Chromosome Location	chr6:54632404-54632405
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs16885982	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16885988	0.82[ASW][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16885992	1.00[ASW][hapmap];0.84[LWK][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16886006	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16886011	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73430674	1.00[AMR][1000 genomes]
rs73446077	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73446082	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73446087	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73446089	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73446094	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9464155	1.00[AMR][1000 genomes]
rs9464159	1.00[AMR][1000 genomes]
rs9464160	1.00[AMR][1000 genomes]
rs9464167	1.00[AMR][1000 genomes]
rs9475055	1.00[TSI][hapmap]
rs9475065	1.00[AMR][1000 genomes]
rs9475066	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv885900	chr6:54517968-54852462	Active TSS Bivalent Enhancer Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv885901	chr6:54588069-54635417	Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv885902	chr6:54588069-54656673	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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