Variant report

Variant	rs73431758
Chromosome Location	chr7:119690610-119690611
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:119690478..119693028-chr7:119696075..119698401,3	K562	blood:
2	chr7:119689166..119691209-chr7:119692487..119694481,2	K562	blood:
3	chr7:119544617..119547371-chr7:119688407..119692790,3	K562	blood:

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10280627	0.90[ASN][1000 genomes]
rs10280758	0.90[ASN][1000 genomes]
rs17142497	0.90[ASN][1000 genomes]
rs1989217	0.90[ASN][1000 genomes]
rs55997859	0.84[AMR][1000 genomes]
rs58183333	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs58192464	0.94[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs58717470	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs59032327	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs59303341	0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs59447974	0.84[AMR][1000 genomes]
rs59585910	0.84[AMR][1000 genomes]
rs61485753	0.89[AMR][1000 genomes]
rs6951188	0.90[ASN][1000 genomes]
rs6963042	0.90[ASN][1000 genomes]
rs6973663	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs6975320	0.90[ASN][1000 genomes]
rs73431755	0.80[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs73431761	0.90[ASN][1000 genomes]
rs73431762	0.80[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs73431766	0.94[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs73431767	0.94[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs73431773	0.80[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs73431782	0.92[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs73431793	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs73433665	0.89[AMR][1000 genomes]
rs73441608	0.89[AMR][1000 genomes]
rs73721058	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7799093	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470388	chr7:119464310-119790102	Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	esv2753623	chr7:119532049-119770049	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv831112	chr7:119585169-119776619	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv1024054	chr7:119638121-119700508	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv831113	chr7:119683515-119886277	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
6	nsv521233	chr7:119686018-119697233	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:119687600-119692800	Weak transcription	K562	blood
2	chr7:119690600-119691000	Enhancers	Ovary	ovary

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