Variant report

Variant	rs73470083
Chromosome Location	chr18:40410345-40410346
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs59819966	0.82[AFR][1000 genomes]
rs60655873	0.84[AFR][1000 genomes]
rs60794152	0.84[AFR][1000 genomes]
rs7239046	0.84[AFR][1000 genomes]
rs73482696	0.82[AFR][1000 genomes]
rs73482700	0.82[AFR][1000 genomes]
rs73484667	0.82[AFR][1000 genomes]
rs73484670	0.82[AFR][1000 genomes]
rs73484678	0.82[AFR][1000 genomes]
rs73486758	0.84[AFR][1000 genomes]
rs8085497	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1056794	chr18:40197837-40688514	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:40410000-40410600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr18:40410200-40410400	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr18:40410200-40410800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr18:40410200-40411800	Enhancers	iPS-18 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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