Variant report

Variant	rs73472810
Chromosome Location	chr7:147352407-147352408
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17170636	0.89[ASN][1000 genomes]
rs1990251	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28407127	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6947112	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73472812	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73472817	0.98[EUR][1000 genomes]
rs73744519	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
2	nsv516942	chr7:147337742-147354931	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
3	nsv527018	chr7:147337742-147360817	Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147349000-147355600	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr7:147349000-147355600	Weak transcription	Fetal Lung	lung
3	chr7:147350800-147355400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr7:147350800-147355600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr7:147351200-147355600	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr7:147351800-147355400	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr7:147351800-147355400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr7:147351800-147355600	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr7:147351800-147355600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr7:147351800-147355600	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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