Variant report

Variant	rs73496145
Chromosome Location	chr11:75735248-75735249
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:75725861..75727648-chr11:75734712..75737245,2	K562	blood:
2	chr11:75728440..75730003-chr11:75733713..75735463,2	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs17134495	0.82[AFR][1000 genomes]
rs56057576	1.00[AMR][1000 genomes]
rs56376662	1.00[AMR][1000 genomes]
rs59525081	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60273992	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7111896	0.86[AFR][1000 genomes]
rs73493976	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73498258	0.86[AFR][1000 genomes]
rs7939974	0.94[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv515973	chr11:75569267-75832315	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:99 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:75709200-75745400	Weak transcription	Psoas Muscle	Psoas
2	chr11:75711600-75743600	Weak transcription	Pancreas	Pancrea
3	chr11:75713800-75737200	Strong transcription	Primary B cells from cord blood	blood
4	chr11:75713800-75739600	Weak transcription	Fetal Brain Female	brain
5	chr11:75716800-75778200	Weak transcription	Ovary	ovary
6	chr11:75717000-75736200	Weak transcription	Brain Angular Gyrus	brain
7	chr11:75717000-75741200	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr11:75717200-75741400	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr11:75717600-75739600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr11:75717800-75741200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
11	chr11:75718400-75746400	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr11:75718400-75755200	Weak transcription	Esophagus	oesophagus
13	chr11:75719400-75736000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr11:75719400-75755000	Weak transcription	Left Ventricle	heart
15	chr11:75720000-75757600	Weak transcription	Rectal Mucosa Donor 29	rectum
16	chr11:75721600-75735600	Weak transcription	Muscle Satellite Cultured Cells	--
17	chr11:75723800-75736200	Weak transcription	Brain Anterior Caudate	brain
18	chr11:75724000-75737400	Weak transcription	Fetal Brain Male	brain
19	chr11:75724800-75743600	Weak transcription	Aorta	Aorta
20	chr11:75728600-75738000	Weak transcription	HUES48 Cell Line	embryonic stem cell
21	chr11:75728800-75736000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr11:75728800-75736000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
23	chr11:75728800-75738000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
24	chr11:75728800-75741400	Weak transcription	Hela-S3	cervix
25	chr11:75728800-75742600	Strong transcription	Primary B cells from peripheral blood	blood
26	chr11:75728800-75757400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
27	chr11:75729000-75735800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr11:75729000-75735800	Weak transcription	HSMM	muscle
29	chr11:75729000-75736000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
30	chr11:75729000-75759600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
31	chr11:75729200-75735400	Weak transcription	NHLF	lung
32	chr11:75729400-75758200	Weak transcription	Primary T helper cells PMA-I stimulated	--
33	chr11:75730200-75736000	Weak transcription	Duodenum Smooth Muscle	Duodenum
34	chr11:75731200-75736000	Weak transcription	Fetal Lung	lung
35	chr11:75731200-75759800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
36	chr11:75731400-75758200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
37	chr11:75731400-75758400	Weak transcription	Primary T helper cells fromperipheralblood	blood
38	chr11:75731600-75735800	Weak transcription	HUVEC	blood vessel
39	chr11:75731600-75736000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr11:75731600-75739800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr11:75731600-75743600	Weak transcription	Gastric	stomach
42	chr11:75731600-75755000	Weak transcription	Right Ventricle	heart
43	chr11:75731600-75771800	Weak transcription	Lung	lung
44	chr11:75731800-75759000	Weak transcription	Sigmoid Colon	Sigmoid Colon
45	chr11:75732000-75735400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr11:75732000-75739800	Weak transcription	Liver	Liver
47	chr11:75732000-75739800	Weak transcription	Dnd41	blood
48	chr11:75732000-75740400	Weak transcription	Fetal Muscle Trunk	muscle
49	chr11:75732200-75736000	Weak transcription	HUES64 Cell Line	embryonic stem cell
50	chr11:75732200-75736000	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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