Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:119843217..119845553-chr4:119847807..119850128,2	K562	blood:

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10021334	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11098462	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17050270	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17050285	0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs28542234	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57021447	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62326792	0.82[ASN][1000 genomes]
rs62326836	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62326841	0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs736692	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs736693	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs736694	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7654417	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7661292	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7676506	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916641	chr4:119780023-120777320	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	72 gene(s)	inside rSNPs	diseases
2	nsv948802	chr4:119844269-120208926	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:119831600-119847200	Weak transcription	Right Atrium	heart
2	chr4:119833000-119845600	Weak transcription	Aorta	Aorta
3	chr4:119838200-119851600	Enhancers	Rectal Smooth Muscle	rectum
4	chr4:119839800-119847200	Weak transcription	Small Intestine	intestine
5	chr4:119841000-119858400	Weak transcription	Psoas Muscle	Psoas
6	chr4:119841400-119845600	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr4:119842400-119845600	Weak transcription	Left Ventricle	heart
8	chr4:119842600-119861800	Weak transcription	Right Ventricle	heart
9	chr4:119843400-119845200	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr4:119843400-119846000	Weak transcription	Skeletal Muscle Male	skeletal muscle
11	chr4:119843400-119848600	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr4:119843600-119845600	Weak transcription	Fetal Stomach	stomach
13	chr4:119843800-119845800	Weak transcription	Fetal Kidney	kidney
14	chr4:119844000-119847400	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr4:119844200-119848400	Enhancers	Ovary	ovary
16	chr4:119844800-119845400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr4:119844800-119845400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr4:119844800-119846600	Enhancers	Stomach Smooth Muscle	stomach
19	chr4:119845000-119845400	Enhancers	NHEK	skin
20	chr4:119845000-119851800	Enhancers	Colon Smooth Muscle	Colon

Quick Search: