Variant report

Variant	rs73502711
Chromosome Location	chr6:71716639-71716640
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs57717409	1.00[AFR][1000 genomes]
rs60282667	1.00[AFR][1000 genomes]
rs73492602	1.00[AFR][1000 genomes]
rs73494504	1.00[AFR][1000 genomes]
rs73494510	1.00[AFR][1000 genomes]
rs73494512	1.00[AFR][1000 genomes]
rs73494514	1.00[AFR][1000 genomes]
rs73494516	1.00[AFR][1000 genomes]
rs73494521	1.00[AFR][1000 genomes]
rs73494530	1.00[AFR][1000 genomes]
rs73502710	1.00[AFR][1000 genomes]
rs73502713	1.00[AFR][1000 genomes]
rs73502721	1.00[AFR][1000 genomes]
rs73502722	1.00[AFR][1000 genomes]
rs73502730	0.87[AFR][1000 genomes]
rs73502738	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv966627	chr6:71699692-71726851	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71715400-71716800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr6:71716600-71717000	ZNF genes & repeats	ES-WA7 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links