Variant report

Variant	rs73502738
Chromosome Location	chr6:71725841-71725842
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs57717409	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60282667	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61687111	1.00[AMR][1000 genomes]
rs73492602	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73494504	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73494510	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73494512	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73494514	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73494516	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73494521	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73494527	1.00[AMR][1000 genomes]
rs73494530	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73494531	1.00[AMR][1000 genomes]
rs73502710	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73502711	0.87[AFR][1000 genomes]
rs73502713	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73502721	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73502722	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73502725	1.00[AMR][1000 genomes]
rs73502730	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv966627	chr6:71699692-71726851	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71725400-71726000	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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