Variant report

Variant	rs73503720
Chromosome Location	chr9:101769667-101769668
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:101768904..101771612-chr9:101836295..101838610,2	K562	blood:
2	chr9:101767464..101769714-chr9:101783800..101785964,2	MCF-7	breast:
3	chr9:101764776..101767586-chr9:101769172..101770908,2	K562	blood:
4	chr9:101766336..101770748-chr9:101884242..101889062,4	K562	blood:
5	chr9:101767800..101770324-chr9:101773992..101776842,2	K562	blood:
6	chr9:101764776..101766278-chr9:101768248..101770672,2	K562	blood:
7	chr9:101737367..101739848-chr9:101767863..101770116,2	K562	blood:

No data

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1125410	1.00[EUR][1000 genomes]
rs16918058	1.00[EUR][1000 genomes]
rs55803862	1.00[EUR][1000 genomes]
rs60327679	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60878369	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61478524	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7034869	1.00[EUR][1000 genomes]
rs73503727	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73503740	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73503742	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73503747	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73503749	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73503754	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73655904	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7862816	1.00[EUR][1000 genomes]
rs911931	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv6635	chr9:101728257-101773253	Enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:101760200-101772800	Weak transcription	Aorta	Aorta
2	chr9:101761600-101770400	Weak transcription	Fetal Intestine Small	intestine
3	chr9:101761600-101814400	Weak transcription	Gastric	stomach
4	chr9:101761800-101777800	Weak transcription	Pancreas	Pancrea
5	chr9:101761800-101785200	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr9:101763600-101778000	Weak transcription	HSMMtube	muscle
7	chr9:101764000-101770800	Strong transcription	Fetal Muscle Leg	muscle
8	chr9:101764200-101772600	Strong transcription	Adipose Nuclei	Adipose
9	chr9:101764200-101775400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
10	chr9:101767600-101772600	Weak transcription	Ovary	ovary
11	chr9:101767600-101782000	Weak transcription	Rectal Smooth Muscle	rectum
12	chr9:101768200-101770000	Enhancers	K562	blood
13	chr9:101768200-101771400	Enhancers	Placenta Amnion	Placenta Amnion
14	chr9:101768200-101777200	Enhancers	Hela-S3	cervix
15	chr9:101768800-101778000	Weak transcription	Skeletal Muscle Male	skeletal muscle
16	chr9:101768800-101787200	Weak transcription	Right Atrium	heart
17	chr9:101769000-101771400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr9:101769000-101772400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
19	chr9:101769000-101772400	Weak transcription	Left Ventricle	heart
20	chr9:101769000-101790400	Weak transcription	Rectal Mucosa Donor 29	rectum
21	chr9:101769200-101772400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr9:101769200-101777600	Weak transcription	Right Ventricle	heart
23	chr9:101769400-101770400	Weak transcription	Fetal Muscle Trunk	muscle
24	chr9:101769400-101770400	Weak transcription	Placenta	Placenta
25	chr9:101769400-101771400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr9:101769400-101772600	Weak transcription	Fetal Stomach	stomach
27	chr9:101769400-101777800	Weak transcription	Colon Smooth Muscle	Colon
28	chr9:101769400-101777800	Weak transcription	Duodenum Smooth Muscle	Duodenum
29	chr9:101769600-101770000	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr9:101769600-101772200	Weak transcription	Stomach Smooth Muscle	stomach

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