Variant report

Variant	rs73519591
Chromosome Location	chr6:118294409-118294410
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs2501627	1.00[EUR][1000 genomes]
rs521352	1.00[EUR][1000 genomes]
rs528595	1.00[EUR][1000 genomes]
rs59005352	1.00[EUR][1000 genomes]
rs61511968	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs618196	1.00[EUR][1000 genomes]
rs73517506	1.00[EUR][1000 genomes]
rs73519566	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73519570	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73519599	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73521510	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530526	chr6:118027339-118718476	Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:118286600-118301200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr6:118293800-118296200	Weak transcription	Cortex derived primary cultured neurospheres	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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