Variant report

Variant	rs73532221
Chromosome Location	chr6:121758815-121758816
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:121753097..121755980-chr6:121757909..121760037,2	K562	blood:

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs58706853	1.00[EUR][1000 genomes]
rs59722048	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60073741	1.00[EUR][1000 genomes]
rs73528582	1.00[EUR][1000 genomes]
rs73528585	1.00[EUR][1000 genomes]
rs73528596	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73528600	1.00[EUR][1000 genomes]
rs73530299	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73532248	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73532274	1.00[EUR][1000 genomes]
rs73534436	1.00[EUR][1000 genomes]
rs73534449	1.00[EUR][1000 genomes]
rs73536328	1.00[EUR][1000 genomes]
rs73536335	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530527	chr6:121298528-121789855	ZNF genes & repeats Enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	esv3429176	chr6:121756880-121768144	Flanking Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:121755600-121760000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr6:121756000-121760400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr6:121756000-121760800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr6:121756000-121761600	Active TSS	H1 Cell Line	embryonic stem cell
5	chr6:121756200-121761600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
6	chr6:121756200-121763600	Active TSS	Aorta	Aorta
7	chr6:121756200-121764200	Active TSS	Right Atrium	heart
8	chr6:121756400-121759200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr6:121756400-121759400	Active TSS	Adipose Nuclei	Adipose
10	chr6:121756400-121760400	Active TSS	A549	lung
11	chr6:121756400-121760600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr6:121756400-121760800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
13	chr6:121756400-121762400	Active TSS	Left Ventricle	heart
14	chr6:121756600-121759000	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr6:121756600-121759000	Active TSS	Osteobl	bone
16	chr6:121756600-121759200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr6:121756600-121759200	Active TSS	Fetal Kidney	kidney
18	chr6:121756600-121759200	Active TSS	HUVEC	blood vessel
19	chr6:121756600-121759400	Active TSS	Muscle Satellite Cultured Cells	--
20	chr6:121756600-121759400	Active TSS	Fetal Intestine Large	intestine
21	chr6:121756600-121759400	Active TSS	Fetal Intestine Small	intestine
22	chr6:121756600-121759400	Active TSS	Fetal Lung	lung
23	chr6:121756600-121759400	Active TSS	HSMM	muscle
24	chr6:121756600-121759600	Active TSS	Brain Germinal Matrix	brain
25	chr6:121756600-121759800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr6:121756600-121759800	Active TSS	Placenta Amnion	Placenta Amnion
27	chr6:121756600-121760200	Active TSS	NH-A	brain
28	chr6:121756600-121760600	Active TSS	HUES48 Cell Line	embryonic stem cell
29	chr6:121756600-121760600	Active TSS	HUES64 Cell Line	embryonic stem cell
30	chr6:121756600-121760800	Active TSS	NHDF-Ad	bronchial
31	chr6:121756600-121761000	Active TSS	iPS-15b Cell Line	embryonic stem cell
32	chr6:121756600-121761200	Active TSS	iPS-18 Cell Line	embryonic stem cell
33	chr6:121756600-121761400	Active TSS	H9 Cell Line	embryonic stem cell
34	chr6:121756600-121761400	Active TSS	Breast Myoepithelial Primary Cells	Breast
35	chr6:121756600-121761600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr6:121756600-121761600	Active TSS	Ovary	ovary
37	chr6:121756600-121761600	Active TSS	Stomach Smooth Muscle	stomach
38	chr6:121756600-121761800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
39	chr6:121756600-121761800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
40	chr6:121756800-121759200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr6:121756800-121759200	Active TSS	Duodenum Mucosa	Duodenum
42	chr6:121756800-121759200	Active TSS	HSMMtube	muscle
43	chr6:121756800-121759400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr6:121756800-121759400	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr6:121756800-121759400	Active TSS	NHEK	skin
46	chr6:121756800-121759800	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr6:121756800-121759800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
48	chr6:121756800-121759800	Active TSS	Placenta	Placenta
49	chr6:121756800-121759800	Active TSS	Fetal Stomach	stomach
50	chr6:121756800-121759800	Active TSS	NHLF	lung

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