The 2.0 version of rSNPBase

Variant report

Variant rs73550525
Chromosome Location chr6:134314268-134314269
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:134285000-134316600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:134290800-134316400 Weak transcription Esophagus oesophagus
3 chr6:134297000-134318000 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr6:134300400-134315400 Weak transcription Fetal Intestine Small intestine
5 chr6:134302800-134324000 Weak transcription Fetal Muscle Leg muscle
6 chr6:134304800-134314400 Weak transcription Brain Hippocampus Middle brain
7 chr6:134304800-134315600 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr6:134304800-134324000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr6:134304800-134331000 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr6:134305000-134328400 Weak transcription Fetal Stomach stomach
11 chr6:134306000-134324000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr6:134306000-134324000 Weak transcription Brain Anterior Caudate brain
13 chr6:134306200-134316000 Weak transcription Fetal Intestine Large intestine
14 chr6:134306200-134328000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr6:134306800-134314800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr6:134307400-134316400 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr6:134307400-134316600 Weak transcription Duodenum Mucosa Duodenum
18 chr6:134307600-134314800 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr6:134307800-134316800 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr6:134307800-134320400 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr6:134308000-134318400 Weak transcription Primary T cells from cord blood blood
22 chr6:134308400-134316200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr6:134308400-134320400 Weak transcription Placenta Placenta
24 chr6:134308600-134315600 Weak transcription Fetal Brain Female brain
25 chr6:134308800-134319600 Weak transcription Liver Liver
26 chr6:134309400-134327600 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr6:134311600-134316200 Enhancers K562 blood
28 chr6:134311800-134315200 Enhancers Pancreas Pancrea
29 chr6:134311800-134315200 Enhancers Osteobl bone
30 chr6:134311800-134315400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr6:134312000-134314400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr6:134312000-134314600 Enhancers NH-A brain
33 chr6:134312000-134315800 Weak transcription Primary B cells from cord blood blood
34 chr6:134312200-134315800 Weak transcription GM12878-XiMat blood
35 chr6:134312200-134322000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr6:134312400-134314800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr6:134312400-134315000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr6:134312400-134315000 Weak transcription Fetal Muscle Trunk muscle
39 chr6:134312400-134316000 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr6:134312400-134316400 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr6:134312400-134316600 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr6:134312400-134316600 Weak transcription H1 Cell Line embryonic stem cell
43 chr6:134312400-134317600 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr6:134312400-134321000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr6:134312400-134323200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr6:134312400-134349600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr6:134312600-134323200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr6:134312800-134317000 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr6:134312800-134317600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr6:134312800-134318400 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015