Variant report

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ENPP1-7	chr6:132498273-132499766	NONHSAT114959

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs59647867	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60774416	1.00[EUR][1000 genomes]
rs73549533	1.00[EUR][1000 genomes]
rs73549567	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73549592	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551714	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551722	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551740	1.00[EUR][1000 genomes]
rs73551766	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551794	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551802	1.00[EUR][1000 genomes]
rs73553716	1.00[EUR][1000 genomes]
rs73553722	1.00[EUR][1000 genomes]
rs73779168	1.00[EUR][1000 genomes]
rs7741927	1.00[EUR][1000 genomes]
rs7750378	1.00[EUR][1000 genomes]
rs7771183	1.00[EUR][1000 genomes]
rs7771622	1.00[EUR][1000 genomes]
rs9483373	1.00[EUR][1000 genomes]
rs9483375	1.00[EUR][1000 genomes]
rs9493168	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762616	chr6:132404708-132584324	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132486400-132509800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:132499200-132499600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell

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