Variant report

Variant	rs73586298
Chromosome Location	chr6:143900070-143900071
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143897560..143900872-chr6:143902459..143905862,4	K562	blood:
2	chr6:143899013..143902329-chr6:143903736..143905850,3	K562	blood:

rs_ID	r²[population]
rs28402075	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6920158	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7356821	1.00[AMR][1000 genomes]
rs7356827	1.00[AMR][1000 genomes]
rs73586262	1.00[AMR][1000 genomes]
rs7742027	1.00[AMR][1000 genomes]
rs9484765	1.00[AMR][1000 genomes]
rs9496660	1.00[AMR][1000 genomes]
rs9496661	1.00[AMR][1000 genomes]
rs9496662	1.00[AMR][1000 genomes]
rs9496664	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9496665	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9654617	1.00[AMR][1000 genomes]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143866800-143904600	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr6:143878000-143900800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:143878800-143902800	Weak transcription	Colonic Mucosa	Colon
4	chr6:143879200-143902800	Weak transcription	Fetal Intestine Large	intestine
5	chr6:143886400-143900400	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chr6:143891200-143903200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr6:143891800-143902000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
8	chr6:143894400-143907600	Weak transcription	Stomach Mucosa	stomach
9	chr6:143895600-143918200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
10	chr6:143897000-143900400	Weak transcription	HUVEC	blood vessel
11	chr6:143897400-143900400	Weak transcription	Osteobl	bone
12	chr6:143897600-143900400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr6:143897600-143900600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr6:143897600-143900600	Weak transcription	NHDF-Ad	bronchial
15	chr6:143897600-143907600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
16	chr6:143897800-143900200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr6:143898000-143900600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr6:143898000-143900800	Weak transcription	Fetal Muscle Trunk	muscle
19	chr6:143898600-143900600	Weak transcription	Fetal Muscle Leg	muscle
20	chr6:143899200-143901000	Strong transcription	Fetal Intestine Small	intestine
21	chr6:143899200-143903200	Enhancers	Placenta	Placenta
22	chr6:143899400-143918000	Weak transcription	Spleen	Spleen
23	chr6:143899600-143901000	Weak transcription	Primary monocytes fromperipheralblood	blood
24	chr6:143899800-143902800	Weak transcription	Duodenum Mucosa	Duodenum
25	chr6:143899800-143919200	Weak transcription	Monocytes-CD14+_RO01746	blood

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