The 2.0 version of rSNPBase

Variant report

Variant rs6920158
Chromosome Location chr6:143875532-143875533
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143859400-143875600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr6:143859400-143875600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr6:143859400-143876000 Weak transcription Primary hematopoietic stem cells blood
4 chr6:143865000-143875600 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr6:143865400-143877800 Weak transcription Primary monocytes fromperipheralblood blood
6 chr6:143865800-143876000 Weak transcription Fetal Heart heart
7 chr6:143866800-143904600 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr6:143867200-143875800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
9 chr6:143867400-143876000 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr6:143867600-143876000 Enhancers Primary T helper cells PMA-I stimulated --
11 chr6:143868200-143883600 Weak transcription Gastric stomach
12 chr6:143870400-143877000 Enhancers Fetal Intestine Small intestine
13 chr6:143871000-143879000 Weak transcription Duodenum Mucosa Duodenum
14 chr6:143871200-143875600 Weak transcription Small Intestine intestine
15 chr6:143871200-143875800 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr6:143871200-143875800 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr6:143871200-143875800 Weak transcription HMEC breast
18 chr6:143871200-143876200 Weak transcription HSMM muscle
19 chr6:143871400-143875600 Weak transcription Stomach Mucosa stomach
20 chr6:143871400-143875800 Weak transcription NHEK skin
21 chr6:143871400-143876000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr6:143871600-143875600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr6:143871600-143875800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr6:143871600-143876000 Weak transcription GM12878-XiMat blood
25 chr6:143872200-143876000 Enhancers Primary T helper cells fromperipheralblood blood
26 chr6:143872600-143875600 Enhancers Primary T helper 17 cells PMA-I stimulated --
27 chr6:143872600-143875800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
28 chr6:143873200-143875600 Enhancers Primary T helper naive cells from peripheral blood blood
29 chr6:143874000-143875800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
30 chr6:143874000-143876000 Enhancers Primary T regulatory cells fromperipheralblood blood
31 chr6:143874200-143875800 Enhancers Primary T helper naive cells fromperipheralblood blood
32 chr6:143874200-143876000 Enhancers Primary T killer memory cells from peripheral blood blood
33 chr6:143874200-143876000 Enhancers K562 blood
34 chr6:143874200-143877600 Enhancers Fetal Intestine Large intestine
35 chr6:143874600-143875800 Enhancers Primary T cells from cord blood blood
36 chr6:143874600-143876000 Enhancers Primary T cells fromperipheralblood blood
37 chr6:143874600-143876400 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr6:143874800-143875600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr6:143875200-143888200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr6:143875400-143877600 Enhancers Fetal Thymus thymus
41 chr6:143875400-143878200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015