Variant report

Variant	rs73587767
Chromosome Location	chr10:4822003-4822004
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs55806464	1.00[AMR][1000 genomes]
rs60398975	1.00[AMR][1000 genomes]
rs61304148	1.00[AMR][1000 genomes]
rs73587763	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74111721	1.00[AMR][1000 genomes]
rs74111722	1.00[AMR][1000 genomes]
rs74111724	1.00[AMR][1000 genomes]
rs74111777	1.00[AMR][1000 genomes]
rs74111791	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894787	chr10:4385379-4857717	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4806200-4822800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr10:4816000-4822600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr10:4818200-4822400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr10:4818200-4822800	Weak transcription	HSMMtube	muscle
5	chr10:4818400-4822600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr10:4818600-4822400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr10:4818800-4822600	Weak transcription	Osteobl	bone
8	chr10:4818800-4822800	Weak transcription	NHEK	skin
9	chr10:4819000-4822600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr10:4819000-4822600	Weak transcription	HMEC	breast
11	chr10:4819200-4822600	Weak transcription	HSMM	muscle
12	chr10:4820000-4823200	Flanking Active TSS	HUVEC	blood vessel
13	chr10:4820600-4823600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr10:4821000-4822200	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr10:4821200-4822800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr10:4821400-4822200	Enhancers	NHDF-Ad	bronchial
17	chr10:4821600-4822800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr10:4822000-4822400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr10:4822000-4823400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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