The 2.0 version of rSNPBase

Variant report

Variant rs73627654
Chromosome Location chr19:38664287-38664288
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38638200-38667200 Strong transcription Cortex derived primary cultured neurospheres brain
2 chr19:38653600-38665200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr19:38653600-38668600 Strong transcription Primary B cells from peripheral blood blood
4 chr19:38653600-38696400 Weak transcription Small Intestine intestine
5 chr19:38653800-38666600 Strong transcription A549 lung
6 chr19:38653800-38670800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr19:38655200-38669400 Weak transcription Fetal Lung lung
8 chr19:38656200-38675200 Weak transcription Stomach Mucosa stomach
9 chr19:38656400-38670400 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr19:38656400-38670400 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr19:38656400-38670800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr19:38656400-38671400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr19:38656400-38674000 Weak transcription Colon Smooth Muscle Colon
14 chr19:38656800-38669400 Weak transcription Primary hematopoietic stem cells blood
15 chr19:38657400-38665800 Weak transcription NHLF lung
16 chr19:38657600-38673400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr19:38657600-38673800 Weak transcription Placenta Amnion Placenta Amnion
18 chr19:38657600-38696200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr19:38657800-38669600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr19:38658400-38674000 Weak transcription Rectal Smooth Muscle rectum
21 chr19:38658400-38684800 Weak transcription HepG2 liver
22 chr19:38658400-38694000 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr19:38658600-38670800 Weak transcription Fetal Brain Female brain
24 chr19:38658800-38669200 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr19:38658800-38669400 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr19:38658800-38669400 Weak transcription Stomach Smooth Muscle stomach
27 chr19:38658800-38670400 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr19:38659600-38666200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr19:38659600-38666400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr19:38659600-38668800 Weak transcription Primary B cells from cord blood blood
31 chr19:38659600-38673600 Weak transcription H9 Cell Line embryonic stem cell
32 chr19:38659600-38673600 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr19:38659800-38669400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr19:38659800-38670600 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr19:38660400-38669600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr19:38661000-38669400 Weak transcription Liver Liver
37 chr19:38661000-38673200 Weak transcription H1 Cell Line embryonic stem cell
38 chr19:38661200-38668800 Weak transcription Thymus Thymus
39 chr19:38661200-38669400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr19:38661200-38670600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr19:38661200-38671200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr19:38661200-38673600 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr19:38661400-38665800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr19:38661400-38669400 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr19:38661400-38682600 Weak transcription Aorta Aorta
46 chr19:38661600-38670400 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr19:38661600-38671600 Weak transcription Osteobl bone
48 chr19:38661600-38673600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr19:38661600-38674000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr19:38661800-38682400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015