The 2.0 version of rSNPBase

Variant report

Variant rs28581256
Chromosome Location chr19:38620135-38620136
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38591800-38642800 Weak transcription Small Intestine intestine
2 chr19:38600600-38652800 Weak transcription NHDF-Ad bronchial
3 chr19:38603000-38625400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr19:38605800-38625400 Weak transcription HMEC breast
5 chr19:38610800-38643600 Weak transcription HepG2 liver
6 chr19:38611000-38652800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr19:38611200-38625400 Weak transcription NHEK skin
8 chr19:38611600-38621400 Weak transcription Placenta Amnion Placenta Amnion
9 chr19:38611600-38625400 Weak transcription Fetal Heart heart
10 chr19:38611600-38626000 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr19:38611600-38634400 Weak transcription Stomach Mucosa stomach
12 chr19:38611600-38634800 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr19:38611600-38634800 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr19:38611600-38641400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr19:38611600-38653000 Weak transcription HUVEC blood vessel
16 chr19:38611800-38623600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr19:38611800-38623800 Weak transcription GM12878-XiMat blood
18 chr19:38611800-38634600 Weak transcription NH-A brain
19 chr19:38611800-38642600 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr19:38611800-38653000 Weak transcription Fetal Kidney kidney
21 chr19:38613400-38633600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr19:38613400-38634400 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr19:38613600-38620800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr19:38613600-38625600 Weak transcription Hela-S3 cervix
25 chr19:38613600-38634800 Weak transcription Primary T cells fromperipheralblood blood
26 chr19:38613800-38620400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr19:38613800-38620800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr19:38613800-38620800 Weak transcription Primary T cells from cord blood blood
29 chr19:38613800-38620800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr19:38613800-38620800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr19:38613800-38620800 Weak transcription Aorta Aorta
32 chr19:38613800-38620800 Weak transcription Colonic Mucosa Colon
33 chr19:38613800-38620800 Weak transcription Ovary ovary
34 chr19:38613800-38620800 Weak transcription Stomach Smooth Muscle stomach
35 chr19:38613800-38621000 Weak transcription Adipose Nuclei Adipose
36 chr19:38613800-38621000 Weak transcription Pancreas Pancrea
37 chr19:38613800-38621000 Weak transcription Spleen Spleen
38 chr19:38613800-38621000 Weak transcription NHLF lung
39 chr19:38613800-38621200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr19:38613800-38621200 Weak transcription Primary hematopoietic stem cells blood
41 chr19:38613800-38621200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr19:38613800-38621200 Weak transcription Fetal Lung lung
43 chr19:38613800-38621200 Weak transcription Fetal Muscle Trunk muscle
44 chr19:38613800-38621200 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr19:38613800-38621200 Weak transcription Thymus Thymus
46 chr19:38613800-38621400 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr19:38613800-38621600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr19:38613800-38621600 Weak transcription Brain Cingulate Gyrus brain
49 chr19:38613800-38621600 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr19:38613800-38621600 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015